PQS ab initio 4.0 量子化學計算軟體-生化統計分析軟體/新永資訊有限公司

PQS ab initio 4.0 量子化學計算軟體

PQS ab initio 4.0 量子化學計算軟體

  • PQS ab initio 4.0 量子化學計算軟體
  • 編號
  • 類別
    生化統計分析軟體
  • 介紹
    PQS ab initio PROGRAM is the quantum chemistry calculation software which completes the function where Hartree-Fock method and density functional method etc are well used. Good quality of parallel conversion efficiency and structural optimization routine with merit, can realize especially the high-speed characteristic in the calculation which it does as routine work such as property calculation and molecular structural search.
  • 價格

PQS ab initio 4.0 quantum chemical calculation software

4.0 include:
• An efficient vectorized Gaussian integral package allowing
   high angular momentum basis functions and general
   contractions.
• Abelian point group symmetry throughout; utilizes full point
   group symmetry (up to Ih) for geometry optimization step
   and Hessian (2nd derivative) CPHF.
• Closed-shell (RHF) and open-shell (UHF) SCF energies and
   gradients, including several initial wavefunction guess options.
   Improved SCF convergence for open-shell systems.
• Closed-shell (RHF) and open-shell (UHF) density functional
   energies and gradients including all popular exchange-correlati
   on functionals: VWN, B88, OPTX, LYP, P86, PW91, PBE, B97,
   HCTH, B3LYP, make up your own functional etc.
• Fast and accurate pure DFT energies and gradients for large
   basis sets using the Fourier Transform Coulomb (FTC) method.
• Efficient, flexible geometry optimization for all these methods
   including Baker's Eigenvector Following (EF) algorithm for mini     mization and saddle-point search, Pulay’s GDIIS algorithm
   for minimization, use of Cartesian, Z-matrix and delocalized int     ernal coordinates. Includes new coordinates for efficient optimi
   zation of molecular clusters and adsorption/reaction on model     surfaces.
• Full range of geometrical constraints including fixed distances,     planar bends, torsions and out-of-plane bends between any
   atoms in the molecule and frozen (fixed) atoms. Atoms involve     d in constraints do not need to be formally bonded and -
   unlike with a Z matrix - desired constraints do not need to be
   satisfied in the starting geometry.
• Analytical (and numerical) second derivatives for all these
   methods, including the calculation of vibrational frequencies,
   IR intensities, VCD rotational strengths and thermodynamic
   analysis.
• Efficient NMR Chemical Shifts for closed-shell HF and DFT
   wavefunctions.
• A full range of effective core potentials (ECPs), both
   relativistic and non-relativistic, with energies, gradients,
   analytical second derivatives and NMR.
• Closed-shell MP2 energies and analytical gradients and dual-
   basis MP2 energies; numerical MP2 second derivatives.
• Potential scan, including scan + optimization of all other
   degrees of freedom.
• Reaction Path (IRC) following using either Z-matrix, Cartesian
   or mass-weighted Cartesian coordinates.
• Conductor-like screening solvation model (COSMO) including
   energies, analytical gradients, numerical second derivatives
   and NMR.
• Population analysis, including bond orders and atomic valencie
   s (with free valencies for open-shell systems); CHELP and Cioslo
   wski charges.
• Weinhold's Natural Bond Order (NBO) analysis, including
   natural population and steric analysis.
• Properties module with charge, spin-density and electric field
   gradient at the nucleus.
• Polarizabilities and dipole and polarizability derivatives;
   Raman intensities.
• Full Semiempirical package, both open (unrestricted) and
   closed-shell energies and gradients, including MINDO/3,
   MNDO, AM1 and PM3. For the latter, all main group elements
   through the fourth row (except the noble gases) as • well as
   Zinc and Cadmium, have been parametrized.
• Molecular Mechanics using the Sybyl 5.2 and UFF Force Fields.
• QM/MM using the ONIOM method.
• Molecular dynamics using the simple Verlet algorithm.
• Pople-style input for quick input generation and compatibility       with other programs.
• Graphical input generation and display
• All major ab initio functionality is fully parallel (except MP2
   grad ients which is serial only - parallel version under
   development).

 

PQS ab initio 4.0 量子化學計算軟體


4.0包括:

• 一個有效的矢量化高斯積分包,允許高角動量基函數和一般收縮。
• 整個阿貝爾點群對稱;利用全點群對稱性(高達 Ih)進行幾何優化步驟
​   ​​​​​​和 Hessian(二階導數)CPHF。
• 閉殼 (RHF) 和開殼 (UHF) SCF 能量和梯度,包括幾個初始波函數猜測
​​   ​​​​​選項。改進了開殼系統的 SCF 收斂。
• 閉殼 (RHF) 和開殼 (UHF) 密度泛函能量和梯度,包括所有流行的交換
​  ​​​​​​ 相關泛函:VWN、B88、OPTX、LYP、P86、PW91、PBE、B97、
   HCTH、B3LYP,組成您自己的功能性等
• 使用傅立葉變換庫侖 (FTC) 方法快速準確地獲得大基組的純 DFT 能量
​   ​​​​​​和梯度。
• 對所有這些方法進行高效、靈活的幾何優化,包括用於最小化和鞍點搜
   索的 Baker 特徵向量跟隨 (EF) 算法、用於最小化的 Pulay 的 GDIIS
   算法、笛卡爾、Z 矩陣和離域內坐標的使用。包括用於有效優化分子簇
​​​   ​​​​和模型表面吸附/反應的新坐標。
• 全方位的幾何約束,包括分子中任何原子與凍結(固定)原子之間的固
​​   ​​​​​定距離、平面彎曲、扭轉和平面外彎曲。約束中涉及的原子不需要正式
​​​​   ​​​結合,並且 - 與 Z 矩陣不同 - 不需要在起始幾何體中滿足所需的約束。
• 所有這些方法的分析(和數值)二階導數,包括計算振動頻率、
   IR 強度、VCD 旋轉強度和熱力學分析。
• 閉殼 HF 和 DFT 波函數的高效 NMR 化學位移。
• 全方位的有效核心電位 (ECP),包括相對論和非相對論,具有能量、
​   梯度、分析二階導數和 NMR。
• 閉殼 MP2 能量和分析梯度和雙基 MP2 能量;數值 MP2 二階導數。
• 潛在掃描,包括掃描+所有其他自由度的優化。
• 反應路徑 (IRC) 以下使用 Z 矩陣、笛卡爾坐標或質量加權笛卡爾坐標。
• 類似導體的篩選溶劑化模型 (COSMO),包括能量、分析梯度、
​​   ​​​​​數值二階導數和 NMR。
• 總體分析,包括鍵序和原子價(開殼系統的自由價);CHELP 和
   Cioslowski 收費。
• Weinhold 的自然鍵序 (NBO) 分析,包括自然種群和空間分析。
• 具有電荷、自旋密度和原子核電場梯度的屬性模塊。
• 極化率和偶極子和極化率導數;拉曼強度。
• 完整的半經驗包,包括開放(不受限制)和封閉殼能量和梯度,
​​​   ​​​​包括 MINDO/3、MNDO、AM1 和 PM3。對於後者,第四行
​   ​​​​​​的所有主族元素     (惰性氣體除外)以及鋅和鎘均已參數化。
• 使用 Sybyl 5.2 和 UFF 力場的分子力學。
• QM/MM 使用 ONIOM 方法。
• 使用簡單 Verlet 算法的分子動力學。
• 用於快速輸入生成和與其他程序兼容的 Pople 式輸入。
• 圖形輸入生成和顯示
• 所有主要的ab initio功能都是完全並行的(MP2 漸變除外,它僅是串行     的 - 並行版本正在開發中)。

 

EnzFitter 2 酵素動力學資料軟體

EnzFitter是一個通用的曲線擬合軟件包,它的定制功能使其特別適用於酶動力學實驗的分析。例如,對於單底物和雙底物速率數據,可以獲得初始速率和參數值以及它們的置信限。內置模型包括有或沒有底物抑制的Michaelis-Menten,競爭性、非競爭性和混合性抑制,三元復合或有序雙雙系統以及有或沒有底物抑制的乒乓。你可以很容易地在常規代數語法中添加其他模型。

EnzFitter 2 酵素動力學資料軟體

COSMOsim3D and COSMOsar3D 生命科學軟體

The COSMO-RS method has proven the σ-profiles as the crucial information for most ADME properties as solubility, blood-brain-partition coefficients, and intestinal absorption, and even for many adsorption phenomena. Considering this fundamental importance of the σ-profiles for surface interactions of molecules in liquid states, they most likely also carry a large part of information required for the estimation of desolvation and binding processes, which are responsible for the inhibition of enzyme receptors by drug molecules. Thus a high similarity with respect to the σ-profiles appears to be

COSMOsim3D and COSMOsar3D 生命科學軟體

CrystalMaker X 化學分子建構軟體

CrystalMaker X 是一個全新的程序,從頭開始為最新的 Mac 和 Windows 操作系統開發。每一行代碼都經過重新編寫,採用全新的面向對象架構、全新的基於 OpenGL 的圖形引擎、新的界面設計以及全新的、完全集成的結構庫。

CrystalMaker X 化學分子建構軟體